Banner

Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs115254606 chr1:63970884 T/G ITGB3BP chr1:63906441-64059392:- 0.61 6.4 4.48E-8 Box Plot
ACC rs115277592 chr7:64970467 C/T INTS4L1 chr7:64601603-64694600:+ 0.67 5.05 5.79E-6 Box Plot
ACC rs115449590 chr19:42088883 T/C CEACAM21 chr19:42055886-42093197:+ 0.71 5.41 1.63E-6 Box Plot
ACC rs11576299 chr1:213086873 C/G LQK1 chr1:213029947-213031480:- 0.75 6.23 8.33E-8 Box Plot
ACC rs11580720 chr1:235462744 T/G RBM34 chr1:235294498-235324772:- 0.68 5.07 5.45E-6 Box Plot
ACC rs11580722 chr1:235462758 T/A RBM34 chr1:235294498-235324772:- 0.68 5.07 5.45E-6 Box Plot
ACC rs11580724 chr1:235462767 T/A RBM34 chr1:235294498-235324772:- 0.68 5.07 5.45E-6 Box Plot
ACC rs11582817 chr1:213069258 T/A LQK1 chr1:213029947-213031480:- 0.75 6.19 9.52E-8 Box Plot
ACC rs115848784 chr7:76127071 G/T UPK3B chr7:76139745-76145838:+ 0.78 7.09 3.51E-9 Box Plot
ACC rs11586464 chr1:213081828 T/A LQK1 chr1:213029947-213031480:- 0.76 6.49 3.16E-8 Box Plot
ACC rs11603294 chr11:74716143 G/A XRRA1 chr11:74518784-74660245:- 0.67 5.42 1.56E-6 Box Plot
ACC rs116095944 chr7:97408474 T/C TECPR1 chr7:97843936-97881563:- 0.84 5.38 1.83E-6 Box Plot
ACC rs11628710 chr14:74649280 A/G LIN52 chr14:74551499-74667938:+ 0.44 5.35 1.97E-6 Box Plot
ACC rs11641603 chr16:24793432 C/T SLC5A11 chr16:24857162-24922949:+ 1.05 5.48 1.24E-6 Box Plot
ACC rs11644259 chr16:50371463 T/G CYLD chr16:50775961-50835846:+ 0.59 5.45 1.39E-6 Box Plot